ZhongSha 2015
Programme
Informations générales
Chef de mission
Date et lieu de départ
22/07/2015Date et lieu d'arrivée
01/08/2015Navire : Ocean Researcher 1
Objectifs :
Travaux effectués :
Remerciements :
Bibliographie (51) [+] [-]
Exporter les bibliographies
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Ahyong S.T. & Ng P.K. 2017. East Asian Cymonomid Crabs (Crustacea: Brachyura). Zoological Studies 56(24): 1-20. DOI:10.6620/ZS.2017.56-24
Résumé [+] [-]Cymonomid crabs are small cryptic deep-water brachyurans occurring worldwide. Six species have been reported from East Asia: one from both Taiwan and Japan (C. andamanicus Alcock, 1905) and five from Japan only (C. curvirostris Sakai, 1965, C. japonicus Balss, 1922, C. sagamiensis Sakai, 1983, C. soela Ahyong and Brown, 2003, C. umitakae Takeda, 1981). Cymonomus curvirostris, C. japonicus, C. sagamiensis and C. umitakae were described from Japanese waters, but C. andamanicus and C. soela have much more distant type localities - the Andaman Sea and southeastern Australia, respectively. We review all previous records of Cymonomus from East Asia, describe two new species, and clarify the status of records of C. andamanicus and C. soela from the region. Records of C. andamanicus and C. soela from East Asia are referable to two new species occurring in both Taiwan and Japan. The identities of C. japonicus and C. sagamiensis are fixed by neotype selection; C. sagamiensis is made a junior objective synonym of C. umitakae. Six species of Cymonomus are now recorded from Japan, of which two also occur off Taiwan. We also report on cymonomids collected by Taiwanese research vessels in the South China Sea (Dongsha and Macclesfield Bank) of which four species were collected, including C. hakuhoae Takeda and Moosa, 1990, not previously found in Japan or Taiwan. A key to the species of Cymonomus from East Asia and the South China Sea is included.
Campagnes accessibles citées (8) [+] [-]AURORA 2007, DongSha 2014, NanHai 2014, PANGLAO 2005, TAIWAN 2000, TAIWAN 2001, TAIWAN 2003, ZhongSha 2015
Codes des collections associés: IU (Crustacés) -
Bitner M.A. & Romanin M. 2018. Recent brachiopods collected during the ZhongSha 2015 expedition to the South China Sea, West Pacific. Marine Biology Research 14(6): 551-564. DOI:10.1080/17451000.2018.1502447
Résumé [+] [-]Fourteen species of Recent brachiopods belonging to the genera Novocrania, Basiliola, Acanthobasiliola, Gryphus, Zygonaria, Terebratulina, Eucalathis, Laqueus, Frenulina, Annuloplatidia, Phaneropora, Dallina and Campages have been identified in the samples collected during the French–Taiwanese ZhongSha 2015 expedition to the South China Sea, West Pacific. Five species were already described from this region. The remaining species represent first records for the South China Sea, among them two species, Annuloplatidia curiosa and Phaneropora galatheae are recorded for the first time in the northern hemisphere.
Campagnes accessibles citées (1) [+] [-]
Codes des collections associés: IB (Bryozoaires Brachiopodes) -
Chang S.C. & Chan T.Y. 2019. On the clawed lobsters of the genus Nephropsis Wood-Mason, 1872 recently collected from deep-sea cruises off Taiwan and the South China Sea (Crustacea, Decapoda, Nephropidae). ZooKeys 833: 41-58. DOI:10.3897/zookeys.833.32837
Résumé [+] [-]Recent deep-sea cruises using Taiwanese research vessels off Taiwan and in the South China Sea yielded seven species of the clawed lobster genus Nephropsis Wood-Mason, 1872. Four species are new records for Taiwan (Nephropsis acanthura Macpherson, 1990, N. holthuisi Macpherson, 1993, N. serrata Macpherson, 1993, and N. suhmi Bate, 1888) and three species are new records of Dongsha (under the jurisdiction of Taiwan) in the South China Sea (N. ensirostris Alcock, 1901, N. stewarti Wood-Mason, 1872, and N. suhmi). Altogether, five and four species of this genus are now known from Taiwan and Dongsha, respectively. The diagnostic characters and coloration are illustrated for most, if not all, of these species.
Campagnes accessibles citées (7) [+] [-]
Codes des collections associés: IU (Crustacés) -
Chen H.P., Lee M.Y. & Chen W.J. 2024. Integrative taxonomy reveals unanticipated hidden diversity in the monotypic goosefish genus Lophiomus (Teleostei, Lophiidae), with description of three new species and resurrection of Chirolophius laticeps Ogilby, 1910. European Journal of Taxonomy 943: 239–287. DOI:10.5852/ejt.2024.943.2599
Résumé [+] [-]Thought to be monotypic for decades, the only species in the goosefish genus Lophiomus Gill, Lm. setigerus (Vahl), shows a wide range of morphological variation and is distributed widely in the Indo-West Pacific (IWP). In this study, datasets for two mitochondrial and two nuclear genes sequences obtained from samples of Lophiomus collected in different localities across the IWP were constructed and analyzed to explore the phylogeny and species diversity within the genus. Our integrated approach with multiline evidence unveiled an unanticipated richness of at least six delimited species of Lophiomus. Herein, based on materials already available from museums and new specimens obtained primarily through the Tropical Deep-Sea Benthos program surveying IWP benthic fauna, we formally describe three new species: Lm. immaculioralis sp. nov., Lm. nigriventris sp. nov., and Lm. carusoi sp. nov. Also, we resurrect Lm. laticeps stat. rev. from synonyms of Lm. setigerus. These species can be diagnosed by genetics, body coloration, patterns on the floor of the mouth, peritoneum pigmentation, morphometric measurements, and meristic counts of cranial spines, dorsal-fin spines, and pectoral-fin and pelvic-fin rays from each other and from Lm. setigerus. The species Lm. setigerus, as well as the genus Lophiomus, are re-described accordingly based on the new results. Amended identification keys to the four extant lophiid genera and to species of Lophiomus are also provided.
Campagnes accessibles citées (6) [+] [-]
Codes des collections associés: IC (Ichtyologie) -
Chen J.N., Samadi S. & Chen W.J. 2018. Rhodopsin gene evolution in early teleost fishes. PLOS ONE 13(11): e0206918. DOI:10.1371/journal.pone.0206918
Résumé [+] [-]Rhodopsin mediates an essential step in image capture and is tightly associated with visual adaptations of aquatic organisms, especially species that live in dim light environments (e.g., the deep sea). The rh1 gene encoding rhodopsin was formerly considered a singlecopy gene in genomes of vertebrates, but increasing exceptional cases have been found in teleost fish species. The main objective of this study was to determine to what extent the visual adaptation of teleosts might have been shaped by the duplication and loss of rh1 genes. For that purpose, homologous rh1/rh1-like sequences in genomes of ray-finned fishes from a wide taxonomic range were explored using a PCR-based method, data mining of public genetic/genomic databases, and subsequent phylogenomic analyses of the retrieved sequences. We show that a second copy of the fish-specific intron-less rh1 is present in the genomes of most anguillids (Elopomorpha), Hiodon alosoides (Osteoglossomorpha), and several clupeocephalan lineages. The phylogenetic analysis and comparisons of alternative scenarios for putative events of gene duplication and loss suggested that fish rh1 was likely duplicated twice during the early evolutionary history of teleosts, with one event coinciding with the hypothesized fish-specific genome duplication and the other in the common ancestor of the Clupeocephala. After these gene duplication events, duplicated genes were maintained in several teleost lineages, whereas some were secondarily lost in specific lineages. Alternative evolutionary schemes of rh1 and comparison with previous studies of gene evolution are also reviewed.
Campagnes accessibles citées (5) [+] [-]
Codes des collections associés: IC (Ichtyologie) -
Cobo M., McLaughlin E. & Kocot K.M. 2023. Four new Solenogastres (Mollusca, Aplacophora) from the South China Sea and paraphyly of Proneomeniidae Simroth, 1893. Invertebrate Systematics 37(5): 301-333. DOI:https://doi.org/10.1071/IS22062
Résumé [+] [-]Solenogastres and Caudofoveata (Aplacophora) remain some of the least known molluscs, despite ubiquity in the marine environment and importance in understanding molluscan evolution. The use of new morphological techniques and development of DNA barcode libraries have helped make specimen identification easier. However, for solenogasters, using histology for identification and adequate description of species remains necessary in most cases. This, together with the facts that knowledge about solenogaster species distributions is biased and that most species were described from one or very few individuals, explains why many open questions about the actual distribution, intra- and interspecific variability, etc., remain. We performed an integrative taxonomic study of eight specimens of solenogasters from the South China Sea (West Pacific Ocean) thatresulted in the identification of four new species of Proneomeniidae. Species identification and description following the established diagnostic characters were straightforward. However, phylogenetic analysis of molecular data obtained from these specimens and other members of Proneomeniidae indicate that the family is polyphyletic. We recovered representatives of two other families, Epimeniidae (Epimenia) and Strophomeniidae (Anamenia), nested within Proneomeniidae with strong support. Ancestral character state reconstruction indicates that characters commonly used in solenogaster taxonomy, such as the radula and foregut glands, may be more evolutionarily labile in this group than previously known. Therefore our work fills knowledge gaps regarding the diversity and distribution of members of this family but raises important questions about solenogaster taxonomy and systematics that should be further assessed with additional markers and broader taxon sampling.
Campagnes accessibles citées (3) [+] [-]
Codes des collections associés: IM (Mollusques) -
Criscione F., Hallan A., Fedosov A. & Puillandre N. 2021. Deep Downunder: Integrative taxonomy of Austrobela , Spergo , Theta and Austrotheta (Gastropoda: Conoidea: Raphitomidae) from the deep sea of Australia. Journal of Zoological Systematics and Evolutionary Research 59(8): 1718-1753. DOI:10.1111/jzs.12512
Résumé [+] [-]Recent sampling efforts in the deep seas of southern and eastern Australia have generated a wealth of DNA-suitable material of neogastropods of the family Raphitomidae. Based on this material, a molecular phylogeny of the family has revealed a considerable amount of genus and species level lineages previously unknown to science. These taxa are now the focus of current integrative taxonomic research. As part of this ongoing investigation, this study focuses on the genera Austrobela, Austrotheta (both Criscione, Hallan, Puillandre & Fedosov, 2020), Spergo Dall, 1895 and Theta Clarke, 1959. We subjected a comprehensive mitochondrial DNA dataset of representative deep-sea raphitomids to Automatic Barcode Gap Discovery, which recognized 24 primary species hypotheses (PSHs). Following additional evaluation of shell and radular features, as well as examination of geographic and bathymetric ranges, 18 of these PSHs were converted to secondary species hypotheses (SSHs). Based on the evidence available, the most likely speciation mechanisms involved were evaluated for each pair of sister SSHs, including niche partitioning. Eleven SSHs were recognized as new and their systematic descriptions are provided herein. Of these, four were attributed to Austrobela, one to Austrotheta, four to Spergo and two to Theta. While all new species are endemic to Australian waters, other species studied herein exhibit wide Indo-Pacific distributions, adding to the growing body of evidence suggesting that wide geographic ranges in deep-sea Raphitomidae are more common than previously assumed.
Campagnes accessibles citées (19) [+] [-]AURORA 2007, BATHUS 3, BIOMAGLO, BIOPAPUA, CHALCAL 2, CONCALIS, EBISCO, KANADEEP, KARUBAR, KARUBENTHOS 2, NORFOLK 2, NanHai 2014, PAPUA NIUGINI, SALOMON 2, TAIWAN 2013, Restreint, TARASOC, TERRASSES, ZhongSha 2015
Codes des collections associés: IM (Mollusques) -
Criscione F., Hallan A., Puillandre N. & Fedosov A. 2021. Snails in depth: integrative taxonomy of Famelica, Glaciotomella and Rimosodaphnella (Conoidea: Raphitomidae) from the deep sea of temperate Australia. Invertebrate Systematics 35(8): 940-962. DOI:10.1071/IS21008
Résumé [+] [-]The deep sea of temperate south-eastern Australia appears to be a ‘hotspot’ for diversity and endemism of conoidean neogastropods of the family Raphitomidae. Following a series of expeditions in the region, a considerable amount of relevant DNA-suitable material has become available. A molecular phylogeny based on this material has facilitated the identification of diagnostic morphological characters, allowing the circumscription of monophyletic genera and the introduction of several new genus-level taxa. Both named and new genera are presently being investigated through integrative taxonomy, with the discovery of a significant number of undescribed species. As part of this ongoing investigation, our study focuses on the genera Famelica Bouchet & Warén, 1980, Glaciotomella Criscione, Hallan, Fedosov & Puillandre, 2020 and Rimosodaphnella Cossmann, 1914. We subjected a comprehensive mitochondrial DNA dataset of representative deep-sea raphitomids to the species delimitation methods ABGD and ASAP that recognised 18 and 15 primary species hypotheses (PSHs) respectively. Following additional evaluation of shell and radular features, and examination of geographic and bathymetric ranges, nine of these PSHs were converted to secondary species hypotheses (SSHs). Four SSHs (two in Famelica and two in Rimosodaphnella) were recognised as new, and formal descriptions are provided herein.
Campagnes accessibles citées (14) [+] [-]AURORA 2007, BIOPAPUA, BOA1, EXBODI, KANACONO, KAVIENG 2014, MAINBAZA, PANGLAO 2004, PANGLAO 2005, PAPUA NIUGINI, SALOMON 2, SALOMONBOA 3, TARASOC, ZhongSha 2015
Codes des collections associés: IM (Mollusques) -
Dijkstra H.H. & Maestrati P. 2017. New species and new records of littoral and bathyal living Pectinoidea (Bivalvia: Propeamussiidae, Cyclochlamydidae, Pectinidae) from the western and southwestern Pacific. Zoosystema 39(4): 473-485. DOI:10.5252/z2017n4a3
Campagnes accessibles citées (13) [+] [-]BIOCAL, BIOPAPUA, BORDAU 1, DongSha 2014, GEMINI, KARUBAR, KAVIENG 2014, MADEEP, MUSORSTOM 5, NanHai 2014, PAPUA NIUGINI, TAIWAN 2013, ZhongSha 2015
Codes des collections associés: IM (Mollusques) -
Fassio G., Russini V., Buge B., Schiaparelli S., Modica M.V., Bouchet P. & Oliverio M. 2020. High cryptic diversity in the kleptoparasitic genus Hyalorisia Dall, 1889 (Littorinimorpha: Capulidae) with the description of nine new species from the Indo-West Pacific. Journal of Molluscan Studies 86(4): 401-421. DOI:10.1093/mollus/eyaa028
Résumé [+] [-]Species in the family Capulidae (Littorinimorpha: Capuloidea) display a wide range of shell morphologies. Several species are known to live in association with other benthic invertebrates—mostly bivalves and sabellid worms, but also other gastropods—and are believed to be kleptoparasitic filter feeders that take advantage of the water current produced by the host. This peculiar trophic ecology, implying a sedentary lifestyle, has resulted in highly convergent shell forms. This is particularly true for the genus Hyalorisia Dall, 1889, which occurs in deep water in the Caribbean and Indo-West Pacific provinces, with two nominal species recognized so far. Combining morphological, ecological and molecular data, we assessed the diversity of the genus, its phylogenetic position inside the family and its association with its bivalve host, the genus Propeamussium de Gregorio, 1884 (Pectinoidea), resulting in the description of nine new cryptic species. When sympatric, species of Hyalorisia are associated with different host species, but the same species of Propeamussium may be the host of several allopatric species of Hyalorisia.
Campagnes accessibles citées (17) [+] [-]AURORA 2007, CONCALIS, CORSICABENTHOS 1, EBISCO, KANACONO, KANADEEP, KARUBENTHOS 2, KAVIENG 2014, KOUMAC 2.3, MADEEP, MAINBAZA, MIRIKY, NanHai 2014, PANGLAO 2004, PANGLAO 2005, SALOMON 2, ZhongSha 2015
Codes des collections associés: IM (Mollusques) -
Fassio G., Stefani M., Russini V., Buge B., Bouchet P., Treneman N., Malaquias M.A.E., Schiaparelli S., Modica M.V. & Oliverio M. 2022. Neither slugs nor snails: a molecular reappraisal of the gastropod family Velutinidae. Zoological Journal of the Linnean Society 197(4): 924-964. DOI:10.1093/zoolinnean/zlac091
Résumé [+] [-]Abstract The systematics of the marine mollusc family Velutinidae has long been neglected by taxonomists, mainly because their often internal and fragile shells offer no morphological characters. Velutinids are usually undersampled owing to their cryptic mantle coloration on the solitary, social or colonial ascidians on which they feed and lay eggs. In this study, we address the worldwide diversity and phylogeny of Velutinidae based on the largest molecular dataset (313 specimens) to date, accounting for > 50% of the currently accepted genera, coupled with morphological and ecological data. Velutinids emerge as a diverse group, encompassing four independent subfamily-level lineages, two of which are newly described herein: Marseniopsinae subfam. nov. and Hainotinae subfam. nov. High diversity was found at genus and species levels, with two newly described genera (Variolipallium gen. nov. and Pacifica gen. nov.) and ≥ 86 species in the assayed dataset, 58 of which are new to science (67%). Velutinidae show a remarkable morphological plasticity in shell morphology, mantle extension and chromatic patterns. This variability is likely to be the result of different selective forces, including habitat, depth and trophic interactions.
Campagnes accessibles citées (23) [+] [-]ATIMO VATAE, BIOMAGLO, BIOPAPUA, CEAMARC-AA, CORSICABENTHOS 1, CORSICABENTHOS 2, CORSICABENTHOS 3, GUYANE 2014, ILES DU SALUT, KANACONO, KANADEEP 2, KARUBENTHOS 2, KAVIENG 2014, KOUMAC 2.1, KOUMAC 2.3, MADEEP, MADIBENTHOS, PANGLAO 2004, PAPUA NIUGINI, SAKIZAYA 2019, SANTO 2006, Tuhaa Pae 2013, ZhongSha 2015
Codes des collections associés: IM (Mollusques) -
Fedosov A.E., Malcolm G., Terryn Y., Gorson J., Modica M.V., Holford M. & Puillandre N. 2019. Phylogenetic classification of the family Terebridae (Neogastropoda: Conoidea). Journal of Molluscan Studies 85(4): 359-388. DOI:10.1093/mollus/eyz004
Résumé [+] [-]The conoidean family Terebridae is an intriguing lineage of marine gastropods, which are of considerable interest due to their varied anatomy and complex venoms. Terebrids are abundant, easily recognizable and widely distributed in tropical and subtropical waters, but our findings have demonstrated that their systematics requires revision. Here we elaborate the classification of Terebridae based on a recently published molecular phylogeny of 154 species, plus characters of the shell and anterior alimentary system. The 407 living species of the family, including seven species described herein, are assigned to three subfamilies: Pellifroniinae new subfamily, Pervicaciinae and Terebrinae. The Pellifroniinae comprises five deep-water species in two genera, Pellifronia and Bathyterebra n. gen. Pellifroniinae possess a radula of duplex marginal teeth, well-developed proboscis and venom gland, and a very small rhynchodeal introvert. The Pervicaciinae includes c. 50 species in the predominantly Indo-Pacific genera Duplicaria and Partecosta. Pervicaciinae possess salivary glands, a radula of solid recurved marginal teeth and a weakly developed rhynchodeal introvert, but lack proboscis and venom gland. The remaining Terebridae species are classified into 15 genera in the subfamily Terebrinae (including four genera described herein); nine genera are defined on the basis of phylogenetic data and six solely on shell morphology. The Indo-Pacific genera Profunditerebra n. gen., Maculauger n. gen. and Myurellopsis n. gen. each include about a dozen species. The first is restricted to the deep waters of the Indo-West Pacific, while the latter two range widely in both geographic and bathymetric distribution. Neoterebra n. gen. encompasses about 65 species from a range of localities in the eastern Pacific, Caribbean, and Atlantic, and from varying depths. To characterize the highly diversified genera Terebra, Punctoterebra, Myurella and Duplicaria, each of which comprise several morphological clusters, we propose the use of DNA-based diagnoses. These diagnoses are combined with more informative descriptions to define most of the supraspecific taxa of Terebridae, to provide a comprehensive revision of the group.
Campagnes accessibles citées (20) [+] [-]ATIMO VATAE, CONCALIS, EXBODI, INHACA 2011, KARUBENTHOS 2, KARUBENTHOS 2012, KAVIENG 2014, MADEEP, Restreint, MIRIKY, MUSORSTOM 2, NanHai 2014, PANGLAO 2004, PANGLAO 2005, PAPUA NIUGINI, SALOMON 2, SANTO 2006, TERRASSES, Restreint, ZhongSha 2015
Codes des collections associés: IM (Mollusques) -
Fedosov A.E., Zaharias P., Lemarcis T., Modica M.V., Holford M., Oliverio M., Kantor Y.I. & Puillandre N. 2024. Phylogenomics of Neogastropoda: The Backbone Hidden in the Bush, in Whelan N. (Ed.), Systematic Biology: syae010. DOI:10.1093/sysbio/syae010
Résumé [+] [-]Abstract The molluskan order Neogastropoda encompasses over 15,000 almost exclusively marine species playing important roles in benthic communities and in the economies of coastal countries. Neogastropoda underwent intensive cladogenesis in the early stages of diversification, generating a “bush” at the base of their evolutionary tree, which has been hard to resolve even with high throughput molecular data. In the present study to resolve the bush, we use a variety of phylogenetic inference methods and a comprehensive exon capture dataset of 1817 loci (79.6% data occupancy) comprising 112 taxa of 48 out of 60 Neogastropoda families. Our results show consistent topologies and high support in all analyses at (super)family level, supporting monophyly of Muricoidea, Mitroidea, Conoidea, and, with some reservations, Olivoidea and Buccinoidea. Volutoidea and Turbinelloidea as currently circumscribed are clearly paraphyletic. Despite our analyses consistently resolving most backbone nodes, 3 prove problematic: First, the uncertain placement of Cancellariidae, as the sister group to either a Ficoidea-Tonnoidea clade or to the rest of Neogastropoda, leaves monophyly of Neogastropoda unresolved. Second, relationships are contradictory at the base of the major “core Neogastropoda” grouping. Third, coalescence-based analyses reject monophyly of the Buccinoidea in relation to Vasidae. We analyzed phylogenetic signal of targeted loci in relation to potential biases, and we propose the most probable resolutions in the latter 2 recalcitrant nodes. The uncertain placement of Cancellariidae may be explained by orthology violations due to differential paralog loss shortly after the whole genome duplication, which should be resolved with a curated set of longer loci.
Campagnes accessibles citées (23) [+] [-]ATIMO VATAE, AURORA 2007, BIOMAGLO, BIOPAPUA, CORSICABENTHOS 1, DongSha 2014, EXBODI, ILES DU SALUT, INHACA 2011, KANACONO, KANADEEP, KARUBENTHOS 2, KAVIENG 2014, KOUMAC 2.1, KOUMAC 2.3, MADEEP, MADIBENTHOS, MAINBAZA, NanHai 2014, PAPUA NIUGINI, TAIWAN 2013, Tuhaa Pae 2013, ZhongSha 2015
Codes des collections associés: IM (Mollusques) -
Fraussen K. & Hadorn R. 2006. Phaenomenella, a new genus of deep-water buccinid (Gastropoda: Buccinidae) with the description of a new species from Taiwan. Novapex 7(4): 103-109
Résumé [+] [-]The radula of Manaria inflata Shikama, 1971 is studied and found to differ from bot Manaria Smith, 1906 and Eosipho Thiele, 1929. The new genus Phaenomenella gen. nov. is described to accommodate this species and Aulacofucus insulapratasensis Okutani & Lan, 1994. Another species with identical radula, but different in sculpture and shape is described as Phaenomenella augusta sp. nov.
Campagnes accessibles citées (3) [+] [-]
Codes des collections associés: IM (Mollusques) -
Goulding T.C., Strong E.E. & Quattrini A.M. 2023. Target‐capture probes for phylogenomics of the Caenogastropoda. Molecular Ecology Resources 23(6): 1372-1388. DOI:10.1111/1755-0998.13793
Résumé [+] [-]AbstractTarget‐capture approaches have facilitated a rapid growth in the field of phylogenomics but few probe sets exist for molluscs, an exceptionally rich phylum with unparalleled ecological and morphological diversity. We designed and tested the first universal probe set using Phyluce to capture ultraconserved elements (UCEs) and exon loci from the Subclass Caenogastropoda ‐ one of six major lineages of gastropods. The probe set consists of 29,441 probes designed to target 1142 UCE loci and 1933 exon loci (3075 total). In silico analyses of our probe set yielded an average of 2110 loci from genomes and 1389 loci from transcriptomes of diverse caenogastropods, from which an average of 1669 and 849 loci were retained respectively after screening to remove those that matched multiple contigs. Phylogenetic analyses of the loci extracted from transcriptomes produced well‐supported trees very similar to those published based on transcriptomic analyses. Phylogenetic relationships estimated from loci extracted from genomes recover similar phylogenetic relationships, and indicate that the loci targeted with this probe set are informative for resolving deep phylogenetic relationships. An in vitro analysis of the probe set with the Epitoniidae, a diverse caenogastropod family of uncertain affinity and with poorly resolved evolutionary relationships, recovered a total of 2850 loci. Although preliminary, the analysis of loci captured by our probe set for a small number of epitoniid taxa produced a well‐resolved tree indicating that this probe set is also able to resolve relationships at shallower hierarchical scales. Together, the in silico and in vitro analyses indicate that target‐capture enrichment with this probe set is a useful tool for reconstructing phylogenetic relationships across taxonomic levels and evolutionary time scales.
Campagnes accessibles citées (12) [+] [-]ATIMO VATAE, CORSICABENTHOS 2, KANACONO, KANADEEP 2, KARUBENTHOS 2, KAVIENG 2014, KOUMAC 2.1, KOUMAC 2.3, MADEEP, MADIBENTHOS, SPANBIOS, ZhongSha 2015
Codes des collections associés: IM (Mollusques) -
Hallan A., Criscione F., Fedosov A. & Puillandre N. 2021. Few and far apart: integrative taxonomy of Australian species of Gladiobela and Pagodibela (Conoidea : Raphitomidae) reveals patterns of wide distributions and low abundance. Invertebrate Systematics 35: 181-202. DOI:10.1071/IS20017
Résumé [+] [-]The deep-sea malacofauna of temperate Australia remains comparatively poorly known. However, a recent influx of DNA-suitable material obtained from a series of deep-sea cruises has facilitated integrative taxonomic study on the Conoidea (Caenogastropoda : Neogastropoda). Building on a recent molecular phylogeny of the conoidean family Raphitomidae, this study focussed on the genera Gladiobela and Pagodibela (both Criscione, Hallan, Puillandre & Fedosov, 2020). We subjected a representative mtDNA cox1 dataset of deep-sea raphitomids to ABGD, which recognised 14 primary species hypotheses (PSHs), 9 of which were converted to secondary species hypotheses (SSHs). Following the additional examination of the shell and hypodermic radula features, as well as consideration of bathymetric and geographic data, seven of these SSHs were recognised as new to science and given full species rank. Subsequently, systematic descriptions are provided herein. Of these, five are attributed to Gladiobela (three of which are endemic to Australia and two more widely distributed) and two are placed in Pagodibela (one endemic to southern Australia and one widespread in the Pacific). The rarity of many ‘turrids’ reported in previous studies is confirmed herein, as particularly indicated by highly disjunct geographic records for two taxa. Additionally, several of the studied taxa exhibit wide Indo-Pacific distributions, suggesting that wide geographic ranges in deep-sea ‘turrids’ may be more common than previously assumed. Finally, impediments to deep-sea ‘turrid’ taxonomy in light of such comparative rarity and unexpectedly wide distributions are discussed.
Campagnes accessibles citées (11) [+] [-]ATIMO VATAE, BIOMAGLO, BIOPAPUA, BOA1, EBISCO, EXBODI, KANACONO, PAPUA NIUGINI, SALOMON 2, TARASOC, ZhongSha 2015
Codes des collections associés: IM (Mollusques) -
Houart R. & Buge B.. Noteworthy and New Muricidae (Gastropoda) Collected in the East and South China Seas and off Taiwan. : 23
Résumé [+] [-]Recent expeditions to the China Seas and off Taiwan have resulted in new geographical extensions and new species discoveries in the Muricidae: Abyssotrophon weijencheni n. sp. and Enixotrophon petalospeira n. sp. (Pagodulinae), Scabrotrophon fedosovi n. sp. (Trophoninae) and Siphonochelus hasegawai Houart, Buge & Zuccon, 2021 (Typhinae). A distribution map for each listed species completes the information. Additional information is given for Enixotrophon ziczac (Tiba, 1981) from Japan, not collected during these expeditions but compared with one of the new species described herein.
Campagnes accessibles citées (9) [+] [-]BATHUS 2, DongSha 2014, KAVALAN 2018, MUSORSTOM 6, TAIWAN 2000, TAIWAN 2001, TAIWAN 2002, TAIWAN 2013, ZhongSha 2015
Codes des collections associés: IM (Mollusques) -
Houart R. & Buge B. 2022. Noteworthy and New Muricidae (Gastropoda) Collected in the East and South China Seas and off Taiwan. Venus 80(1-2): 1-23
Résumé [+] [-]Recent expeditions to the China Seas and off Taiwan have resulted in new geographical extensions and new species discoveries in the Muricidae: Abyssotrophon weijencheni n. sp. and Enixotrophon petalospeira n. sp. (Pagodulinae), Scabrotrophon fedosovi n. sp. (Trophoninae) and Siphonochelus hasegawai Houart, Buge & Zuccon, 2021 (Typhinae). A distribution map for each listed species completes the information. Additional information is given for Enixotrophon ziczac (Tiba, 1981) from Japan, not collected during these expeditions but compared with one of the new species described he
Campagnes accessibles citées (9) [+] [-]BIOPAPUA, DongSha 2014, KAVALAN 2018, NanHai 2014, PAPUA NIUGINI, TAIWAN 2000, TAIWAN 2002, TAIWAN 2013, ZhongSha 2015
Codes des collections associés: IM (Mollusques) -
Kantor Y., Fedosov A. & Puillandre N. 2018. New and unusual deep-water Conoidea revised with shell, radula and DNA characters. Ruthenica, Russian Malacological Journal 28(2): 47-82. DOI:10.35885/ruthenica.2018.28(2).1
Résumé [+] [-]In the course of preparation of a new molecular phylogeny of Conoidea based on exon-capture some new species and species with notable morphology were revealed. The taxonomy of these species is discussed and the radula of most of them illustrated for the first time. New genera are described: Comispira gen. nov. (Cochlespiridae), type species Leucosyrinx mai Li et Li, 2008; Pagodaturris gen. nov. (Clavatulidae), type species Pleurotoma molengraaffi Tesch, 1915. New species described: Comispira compta gen. et sp. nov., Sibogasyrinx sangeri sp. nov. (both Cochlespiridae), Pagodaturris philippinensis gen. et sp. nov. (Clavatulidae), Horaiclavus micans sp. nov., Iwaoa invenusta sp. nov. (both Horaiclavidae), Lucerapex cracens sp. nov., Lucerapex laevicarinatus sp. nov. (Turridae), Heteroturris kanacospira sp. nov. (Borsoniidae). Epideira Hedley, 1918 is reallocated from Pseudomelatomidae to Horaiclavidae. The radulae of Kuroshioturris nipponica (Shuto, 1961) (Turridae), Leucosyrinx verrillii (Dall, 1881), and Leucosyrinx luzonica (Powell, 1969) comb. nov. are illustrated for the first time.
Campagnes accessibles citées (19) [+] [-]AURORA 2007, BIOPAPUA, CEAMARC-AA, CONCALIS, DongSha 2014, EBISCO, EXBODI, GUYANE 2014, INHACA 2011, KARUBENTHOS 2, MADEEP, NanHai 2014, PANGLAO 2004, PANGLAO 2005, PAPUA NIUGINI, SALOMON 2, SALOMONBOA 3, SANTO 2006, ZhongSha 2015
Codes des collections associés: IM (Mollusques) -
Kantor Y., Kosyan A., Sorokin P. & Fedosov A. 2020. On the taxonomic position of Phaenomenella Fraussen & Hadorn, 2006 (Neogastropoda, Buccinoidea) with description of two new species. Zoosystema 42(3): 33. DOI:10.5252/zoosystema2020v42a3
Résumé [+] [-]This contribution provides novel information on the anatomy, radula and phylogeny of several species of Phaenomenella Fraussen & Hadorn, 2006, a genus of Buccinoidea Rafinesque, 1815 with unclear affinities. Molecular phylogenetic analysis based on sequences of mitochondrial COI and nuclear 28S rRNA genes of different representatives of Buccinoidea revealed close relationships of Phaenomenella with Siphonalia A. Adams, 1863 both taxa forming a clade with maximal support. The anatomy of two species of the latter genus was examined for the first time for comparative purposes. The subfamily Siphonaliinae Finlay, 1928 was erected for several Recent and fossil genera of Southern Hemisphere Buccinidae Rafinesque, 1815, and is still recognized by current taxonomists (Bouchet et al. 2017). Species of all Recent genera of Siphonaliinae were included in our analysis and the monophyly of the subfamily Siphonaliinae in its original scope is rejected. Molecular and morphological data revealed two still unnamed species of Phaenomenella from the lower bathyal zone of the South China Sea. These species, Phaenomenella nicoi n. sp. and P. samadiae n. sp. are described in the present study.
Campagnes accessibles citées (4) [+] [-]
Codes des collections associés: IM (Mollusques) -
Kantor Y., Bouchet P., Fedosov A., Puillandre N. & Zaharias P. 2024. Generic revision of the Recent Turridae (Neogastropoda: Conoidea). Journal of Molluscan Studies 90(5): eyae032. DOI:10.1093/mollus/eyae032
Résumé [+] [-]ABSTRACT The family Turridae, once considered to encompass the entire diversity of Conoidea, excluding only the cone shells (family Conidae) and the auger shells (family Terebridae), has undergone significant redefinition based on both morphological and molecular data. Prior to this study, it included 15 Recent genera, comprising 209 species. However, a recent comprehensive analysis of an extensive dataset featuring 3,159 cytochrome c oxidase subunit I sequences has unveiled numerous species complexes, new species and previously undiscovered deep lineages. The newly proposed classification of Turridae based on an exon-capture phylogeny recognizes 24 clades, each worthy of genus rank, though only 13 of them had available names. As a result, 11 new genera have been described, namely Thielesyrinx n. gen., Shutogemmula n. gen., Mcleanigemmula n. gen., Pseudogemmula n. gen., Deceptigemmula n. gen., Oliveragemmula n. gen., Powelligemmula n. gen., Kilburnigemmula n. gen., Alisigemmula n. gen., Taylorigemmula n. gen. and Anisogemmula n. gen. With the exception of Thielesyrinx n. gen., species from all of these were previously classified within Gemmula, or Lophiotoma. Notably, some new genera, such as Deceptigemmula n. gen., Kilburnigemmula n. gen., Shutogemmula n. gen. and Taylorigemmula n. gen., cannot be morphologically differentiated, as similar species are found in other genera. Therefore, their distinction relies solely on molecular data. The name Eugemmula is re-instated from the synonymy of Gemmula. Purpuraturris is synonimized with Annulaturris, while Iotyrris with Xenuroturris. In total, we recognize 312 species/primary species hypotheses (PSHs) within the family. Molecular data were obtained for 212 species (among them 15 species complexes comprising in total 45 PSHs), mostly for the first time. A characteristic feature common to the entire family is the position of the relatively narrow anal sinus on the whorl periphery or immediately above it. Radula was examined in representatives of all genera. Although in several cases the radular morphology can aid genus differentiation (e.g. distinguishing Turris from Annulaturris), it is mostly a highly homoplastic structure, with very similar radular types occurring in distantly related genera.
Campagnes accessibles citées (33) [+] [-]ATIMO VATAE, AURORA 2007, BIOMAGLO, BIOPAPUA, BOA1, CONCALIS, DongSha 2014, EBISCO, EXBODI, GUYANE 2014, INHACA 2011, KANACONO, KANADEEP, KARUBENTHOS 2, KARUBENTHOS 2012, KOUMAC 2.1, MADEEP, MADIBENTHOS, MAINBAZA, MUSORSTOM 9, NORFOLK 2, NanHai 2014, PAKAIHI I TE MOANA, PANGLAO 2004, PANGLAO 2005, PAPUA NIUGINI, SALOMON 2, SALOMONBOA 3, TAIWAN 2004, TAIWAN 2013, TARASOC, TERRASSES, ZhongSha 2015
Codes des collections associés: IM (Mollusques) -
Kantor Y.I., Fedosov A.E., Kosyan A.R., Puillandre N., Sorokin P.A., Kano Y., Clark R. & Bouchet P. 2022. Molecular phylogeny and revised classification of the Buccinoidea (Neogastropoda). Zoological Journal of the Linnean Society 194(3): 789-857. DOI:10.1093/zoolinnean/zlab031
Résumé [+] [-]Abstract The superfamily Buccinoidea is distributed across the oceans of the world from the Arctic Ocean to the Antarctic and from intertidal to abyssal depths. It encompasses 3351 recent species in 337 genera. The latest taxonomic account recognized eight full families. For the first time, the monophyly of the superfamily and the relationships among the families are tested with molecular data supplemented by anatomical and radula data. Five genetic markers were used: fragments of mitochondrial COI, 16S rRNA, 12S rRNA and nuclear Histone 3 (H3) and 28S rRNA genes (for 225 species of 117 genera). Our analysis recovered Buccinoidea monophyletic in Bayesian analyses. The relationships between the formerly recognized families and subfamilies are drastically revised and a new classification of the superfamily is here proposed, now including 20 taxa of family rank and 23 subfamilies. Five new families (Chauvetiidae, Dolicholatiridae, Eosiphonidae, Prodotiidae and Retimohniidae) and one subfamily of Nassariidae (Tomliniinae) are described. Austrosiphonidae and Tudiclidae are resurrected from synonymy and employed in a new taxonomical extension. All but 40 recent genera are reclassified. Our results demonstrate that anatomy is rather uniform within the superfamily. With exceptions, the rather uniform radular morphology alone does not allow the allocation of genera to a particular family without additional molecular data.
Campagnes accessibles citées (42) [+] [-]ATIMO VATAE, AURORA 2007, BIOPAPUA, BOA1, CEAMARC-AA, CHALCAL 2, CONCALIS, CORSICABENTHOS 1, Restreint, Restreint, DongSha 2014, EBISCO, GUYANE 2014, ILES DU SALUT, INHACA 2011, KANACONO, KARUBENTHOS 2, KARUBENTHOS 2012, KAVALAN 2018, KOUMAC 2.1, KOUMAC 2.3, MADIBENTHOS, MAINBAZA, MIRIKY, MUSORSTOM 4, Restreint, NORFOLK 2, NanHai 2014, PANGLAO 2004, PANGLAO 2005, PAPUA NIUGINI, Restreint, SALOMON 2, SALOMONBOA 3, SANTO 2006, TAIWAN 2000, TAIWAN 2004, TARASOC, TERRASSES, Tuhaa Pae 2013, Restreint, ZhongSha 2015
Codes des collections associés: IM (Mollusques) -
Kantor Y.I., Kosyan A., Sorokin P., Herbert D.G. & Fedosov A. 2020. Review of the abysso-hadal genus Bayerius (Gastropoda: Neogastropoda: Buccinidae) from the North-West Pacific, with description of two new species. Deep Sea Research Part I: Oceanographic Research Papers 160: 103256. DOI:10.1016/j.dsr.2020.103256
Résumé [+] [-]The abyssal and hadal Buccinoidea from the north-western Pacific formerly attributed to the genera Tacita and Calliloncha were analyzed for the first time using both multilocus molecular and morphological data. The results allow re-evaluation of the inter- and intrageneric variability of morphological characters and demonstrate that Tacita, Calliloncha and Paracalliloncha are synonyms of Bayerius, a genus widely distributed in the Pacific Ocean. In our reconstructed phylogeny the genus forms a maximally supported clade with Pararetifusus tenuis and Turrisipho dalli. At present, Bayerius includes 10 species, two of which are described herein as new to science, B. inflatus sp. nov. and B. nekrasovorum sp. nov. with one additional undescribed species represented in our material by a single specimen. The genus is reviewed, with the addition of new data on anatomy and distribution, based on newly obtained material. B. peruvianus is synonymized with B. zenkewitchi. Calliloncha nankaiensis together with Costaria crosnieri are attributed to a new genus, Warenius gen. nov., which clusters with several genera of Buccinoidea from biogenic substrata.
Campagnes accessibles citées (9) [+] [-]ATIMO VATAE, AURORA 2007, KARUBENTHOS 2012, MIRIKY, PANGLAO 2005, PAPUA NIUGINI, SALOMON 2, TAIWAN 2004, ZhongSha 2015
Codes des collections associés: IM (Mollusques) -
Kantor Y.I., Castelin M., Fedosov A. & Bouchet P. 2020. The Indo-Pacific Amalda (Neogastropoda, Olivoidea, Ancillariidae) revisited with molecular data, with special emphasis on New Caledonia. European Journal of Taxonomy 706: 1-52. DOI:10.5852/ejt.2020.706
Résumé [+] [-]In the ancillariid genus Amalda, the shell is character rich and 96 described species are currently treated as valid. Based on shell morphology, several subspecies have been recognized within Amalda hilgendorfi, with a combined range extending at depths of 150–750 m from Japan to the South-West Pacific. A molecular analysis of 78 specimens from throughout this range shows both a weak geographical structuring and evidence of gene flow at the regional scale. We conclude that recognition of subspecies (richeri Kilburn & Bouchet, 1988, herlaari van Pel, 1989, and vezzaroi Cossignani, 2015) within A. hilgendorfi is not justified. By contrast, hilgendorfi-like specimens from the Mozambique Channel and New Caledonia are molecularly segregated, and so are here described as new, as Amalda miriky sp. nov. and A. cacao sp. nov., respectively. The New Caledonia Amalda montrouzieri complex is shown to include at least three molecularly separable species, including A. allaryi and A. alabaster sp. nov. Molecular data also confirm the validity of the New Caledonia endemics Amalda aureomarginata, A. fuscolingua, A. bellonarum, and A. coriolis. The existence of narrow range endemics suggests that the species limits of Amalda with broad distributions, extending, e.g., from Japan to Taiwan (A. hinomotoensis) or even Indonesia, the Strait of Malacca, Vietnam and the China Sea (A. mamillata) should be taken with caution.
Campagnes accessibles citées (41) [+] [-]ATIMO VATAE, BATHUS 1, BATHUS 2, BATHUS 3, BIOCAL, BIOPAPUA, CHALCAL 1, CONCALIS, EBISCO, EXBODI, HALIPRO 1, INHACA 2011, KANACONO, KANADEEP, KARUBENTHOS 2012, KAVIENG 2014, LAGON, MADEEP, MAINBAZA, MIRIKY, MUSORSTOM 4, MUSORSTOM 5, NORFOLK 1, NORFOLK 2, NanHai 2014, PANGLAO 2005, PAPUA NIUGINI, Restreint, SALOMON 2, SALOMONBOA 3, SANTO 2006, SMIB 1, SMIB 2, SMIB 3, SMIB 4, SMIB 5, SMIB 8, TERRASSES, VAUBAN 1978-1979, Restreint, ZhongSha 2015
Codes des collections associés: IM (Mollusques) -
Lee B.Y., Richer de Forges B. & Ng P.K. 2017. Deep-sea spider crabs of the families Epialtidae MacLeay, 1838 and Inachidae MacLeay, 1838, from the South China Sea, with descriptions of two new species (Decapoda, Brachyura, Majoidea). European Journal of Taxonomy 358: 1-37. DOI:10.5852/ejt.2017.358
Campagnes accessibles citées (3) [+] [-]
Codes des collections associés: IU (Crustacés) -
Lee B.Y., Richer de Forges B. & Ng P.K.L. 2021. The generic affinities of the Indo-West Pacific species assigned to Rochinia A. Milne-Edwards, 1875 (Crustacea: Brachyura: Majoidea: Epialtidae). Raffles Bulletin of Zoology 69: 19-44. DOI:10.26107/RBZ-2021-0004
Résumé [+] [-]The single most species-rich genus in the majoid family Epialtidae MacLeay, 1838, is Rochinia A. Milne-Edwards, 1875. Ng et al. (2008) listed 34 species and since then the number of species has continued to grow, especially in the Indo-West Pacific region (see Takeda, 2001; Takeda & Komatsu, 2005; Ng & Richer de Forges, 2007; Richer de Forges & Poore, 2008; Takeda, 2009; McLay, 2009; Ng & Richer de Forges, 2013; Richer de Forges & Ng, 2013; Takeda & Marumura, 2014; Lee et al., 2017; Lee et al., 2019). The systematic problems with the genus are well known; Rochinia, as defined by Griffin & Tranter (1986a) was too broad and clearly polyphyletic. Rochinia sensu Griffin & Tranter (1986a) includes four synonyms: Sphenocarcinus A. Milne-Edwards, 1875, Scyramathia A. Milne-Edwards, 1880, Anamathia Smith, 1885, and Oxypleurodon Miers, 1885. Griffin & Tranter (1986a) also transferred three species that were described under Hyastenus White, 1847, and Pugettia Dana, 1851, to Rochinia. Goniopugettia Sakai, 1986, a genus overlooked by Griffin & Tranter (1986a), included Rochinia sagamiensis (Gordon, 1930), and was recognised by Ng et al.
Campagnes accessibles citées (11) [+] [-]AURORA 2007, BIOPAPUA, DongSha 2014, KAVIENG 2014, MADEEP, MUSORSTOM 5, NanHai 2014, PANGLAO 2005, SALOMONBOA 3, TARASOC, ZhongSha 2015
Codes des collections associés: IU (Crustacés) -
Lee S.H., Lee M.Y., Matsunuma M. & Chen W.J. 2019. Exploring the Phylogeny and Species Diversity of Chelidoperca (Teleostei: Serranidae) From the Western Pacific Ocean by an Integrated Approach in Systematics, With Descriptions of Three New Species and a Redescription of C. lecromi Fourmanoir, 1982. Frontiers in Marine Science 6: 465. DOI:10.3389/fmars.2019.00465
Résumé [+] [-]With 11 species, the genus Chelidoperca is a small group of teleost fishes belonging to the Serranidae. They are bottom-dwelling fishes living on continental shelves/slopes in offshore areas or on remote seamounts/banks at depths ranging from around 40–400m mostly in the tropical Indo-West Pacific. Over the past few years, efforts have been made to resolve the taxonomy of Chelidoperca, and subsequently four new species were described. However, these recent advances were made with a traditional approach (i.e., morphology) and limited examinable materials, usually preserved specimens, from ichthyological collections. Further investigations are still needed to address the gaps in our knowledge about their diversity, phylogeny, and biogeography. In this study, we collected 65 new samples, mainly during eight biodiversity expeditions carried out between 2007 and 2016 in the West Pacific under the Tropical Deep-Sea Benthos program. Specimens were photographed after collection to record fresh color patterns, which are essential for species diagnosis. Our analytical approach includes state-of-the-art DNA-based methods for species delimitation. The combined evidence from both molecular and morphological examinations, as well as other information such as geography, is used to test species validity. This reveals 15 species, including six new ones. We formally describe herein C. leucostigmata sp. nov., C. microdon sp. nov., and C. barazeri sp. nov. on the basis of specimens collected on Macclesfield Bank in the South China Sea, on the Chesterfield and Island of Pines plateau of New Caledonia, and off the New Ireland Province of Papua New Guinea, respectively. These new species are morphologically distinct from all other known species of Chelidoperca by body color pattern and combinations of a few identified characters. We also redescribe one of the lesser known species, C. lecromi, from fresh specimens collected close to its type locality and a new site in the Coral Sea. The distributional records for this and other known species are updated accordingly. Genetic references of the species as well as an updated identification key to western Pacific species are also provided.
Campagnes accessibles citées (8) [+] [-]
Codes des collections associés: IC (Ichtyologie) -
Lemaitre R., Rahayu D.L. & Komai T. 2018. A revision of “blanket-hermit crabs” of the genus Paguropsis Henderson, 1888, with the description of a new genus and five new species (Crustacea, Anomura, Diogenidae). ZooKeys 752: 17-97. DOI:10.3897/zookeys.752.23712
Résumé [+] [-]For 130 years the diogenid genus Paguropsis Henderson, 1888 was considered monotypic for an unusual species, P. typica Henderson, 1888, described from the Philippines and seldom reported since. Although scantly studied, this species is known to live in striking symbiosis with a colonial sea anemone that the hermit can stretch back and forth like a blanket over its cephalic shield and part of cephalothoracic appendages, and thus the common name “blanket-crab”. During a study of paguroid collections obtained during recent French-sponsored biodiversity campaigns in the Indo-West Pacific, numerous specimens assignable to Paguropsis were encountered. Analysis and comparison with types and other historical specimens deposited in various museums revealed the existence of five undescribed species. Discovery of these new species, together with the observation of anatomical characters previously undocumented or poorly described, including coloration, required a revision of the genus Paguropsis. The name Chlaenopagurus andersoni Alcock & McArdle, 1901, considered by Alcock (1905) a junior synonym of P. typica, proved to be a valid species and is resurrected as P. andersoni (Alcock, 1899). In two of the new species, the shape of the gills, length/width of exopod of maxilliped 3, width and shape of sternite XI (of pereopods 3), and armature of the dactyls and fixed fingers of the chelate pereopods 4, were found to be characters so markedly different from P. typica and other species discovered that a new genus for them, Paguropsina gen. n., is justified. As result, the genus Paguropsis is found to contain five species: P. typica, P. andersoni, P. confusa sp. n., P. gigas sp. n., and P. lacinia sp. n. Herein, Paguropsina gen. n., is proposed and diagnosed for two new species, P. pistillata gen. et sp. n., and P. inermis gen. et sp. n.; Paguropsis is redefined, P. typica and its previously believed junior synonym, P. andersoni, are redescribed. All species are illustrated, and color photographs provided. Also included are a summary of the biogeography of the two genera and all species; remarks on the significance of the unusual morphology; and remarks on knowledge of the symbiotic anemones used by the species. To complement the morphological descriptions and assist in future population and phylogenetic investigations, molecular data for mitochondrial COI barcode region and partial sequences of 12S and 16S rRNA are reported. A preliminary phylogenetic analysis using molecular data distinctly shows support for the separation of the species into two clades, one with all five species of Paguropsis, and another with the two species Paguropsina gen. n.
Campagnes accessibles citées (28) [+] [-]BATHUS 3, BIOPAPUA, BORDAU 1, BORDAU 2, CORINDON 2, Restreint, Restreint, EBISCO, KARUBAR, LIFOU 2000, LITHIST, LUMIWAN 2008, MADEEP, MAINBAZA, MIRIKY, MUSORSTOM 1, MUSORSTOM 2, MUSORSTOM 3, MUSORSTOM 5, MUSORSTOM 6, NORFOLK 1, NORFOLK 2, NanHai 2014, PANGLAO 2004, PANGLAO 2005, SALOMON 1, SALOMON 2, ZhongSha 2015
Codes des collections associés: IU (Crustacés) -
Modica M.V., Gorson J., Fedosov A.E., Malcolm G., Terryn Y., Puillandre N. & Holford M. 2020. Macroevolutionary Analyses Suggest That Environmental Factors, Not Venom Apparatus, Play Key Role in Terebridae Marine Snail Diversification, in Serb J. (Ed.), Systematic Biology 69(3): 413-430. DOI:10.1093/sysbio/syz059
Résumé [+] [-]Abstract How species diversification occurs remains an unanswered question in predatory marine invertebrates, such as sea snails of the family Terebridae. However, the anatomical disparity found throughput the Terebridae provides a unique perspective for investigating diversification patterns in venomous predators. In this study, a new dated molecular phylogeny of the Terebridae is used as a framework for investigating diversification of the family through time, and for testing the putative role of intrinsic and extrinsic traits, such as shell size, larval ecology, bathymetric distribution, and anatomical features of the venom apparatus, as drivers of terebrid species diversification. Macroevolutionary analysis revealed that when diversification rates do not vary across Terebridae clades, the whole family has been increasing its global diversification rate since 25 Ma. We recovered evidence for a concurrent increase in diversification of depth ranges, while shell size appeared to have undergone a fast divergence early in terebrid evolutionary history. Our data also confirm that planktotrophy is the ancestral larval ecology in terebrids, and evolutionary modeling highlighted that shell size is linked to larval ecology of the Terebridae, with species with long-living pelagic larvae tending to be larger and have a broader size range than lecithotrophic species. Although we recovered patterns of size and depth trait diversification through time and across clades, the presence or absence of a venom gland (VG) did not appear to have impacted Terebridae diversification. Terebrids have lost their venom apparatus several times and we confirm that the loss of a VG happened in phylogenetically clustered terminal taxa and that reversal is extremely unlikely. Our findings suggest that environmental factors, and not venom, have had more influence on terebrid evolution.
Campagnes accessibles citées (14) [+] [-]ATIMO VATAE, EXBODI, INHACA 2011, KARUBENTHOS 2, KAVIENG 2014, MADEEP, MAINBAZA, MIRIKY, NanHai 2014, PANGLAO 2005, SALOMON 2, SANTO 2006, TERRASSES, ZhongSha 2015
Codes des collections associés: IM (Mollusques) -
Ng P.K. & Richer de Forges B. 2017. On a collection of Homolidae from the South China Sea, with descriptions of two new species of Homologenus A. Milne-Edwards, in Henderson, 1888, and the identities of Homologenus malayensis Ihle, 1912, and Lamoha superciliosa (Wood-Mason, in Wood-Mason & Alcock, 1891). Raffles Bulletin of Zoology 65: 243-268
Campagnes accessibles citées (4) [+] [-]
Codes des collections associés: IU (Crustacés) -
Nocella E., Fassio G., Zuccon D., Puillandre N., Modica M.V. & Oliverio M. 2024. From coral reefs into the abyss: the evolution of corallivory in the Coralliophilinae (Neogastropoda, Muricidae). Coral Reefs 43(5): 1285-1302. DOI:10.1007/s00338-024-02537-1
Résumé [+] [-]In this study, we delved into the interaction between corallivorous marine gastropods, the muricid Coralliophilinae Chenu, 1859, and their cnidarian food targets. Coralliophilinae is a subfamily of specialised corallivorous caenogastropods that feed by browsing on octocorals or hexacorals. Only sparse information is available on the phylogenetic relationships and the degree of specificity of the trophic relationships within this corallivorous lineage. To address these gaps, we generated the largest molecular dataset to date, comprising two mitochondrial (cox1 and 16S rDNA) and one nuclear gene (ITS2 rDNA) from 586 specimens collected worldwide. The coral hosts of coralliophilines were identified through an integrative approach, combining literature data with new records, employing morphological and/or molecular markers, and incorporating data from DNA barcoding of the snail stomach content. Our comprehensive approach unveiled the existence of numerous cryptic species in Coralliophilinae, while the phylogeny showed that most of the currently accepted genera are not monophyletic. The molecular dating confirmed the origin of the Coralliophilinae in Middle Eocene, with diversification of most lineages during the Miocene. Our results indicate that the subfamily’s ancestor evolved in shallow waters in association with Scleractinia. Through the evolutionary history of Coralliophilinae, multiple host shifts to other cnidarian orders were observed, not correlated with changes in the depth range. The results of diversification analyses within the subfamily further suggest that the association with the host has influenced the evolutionary patterns of Coralliophilinae, but not vice versa.
Campagnes accessibles citées (27) [+] [-]ATIMO VATAE, BIOMAGLO, CONCALIS, CORSICABENTHOS 2, CORSICABENTHOS 3, EBISCO, EXBODI, GUYANE 2014, INHACA 2011, KARUBENTHOS 2, KAVIENG 2014, LIFOU 2000, MADIBENTHOS, MAINBAZA, MIRIKY, NORFOLK 2, NanHai 2014, PAKAIHI I TE MOANA, PANGLAO 2004, PANGLAO 2005, PAPUA NIUGINI, SANTO 2006, TARASOC, TERRASSES, Tuhaa Pae 2013, Walters Shoal, ZhongSha 2015
Codes des collections associés: IM (Mollusques) -
Nocella E., Zvonareva S.S., Fassio G., Pica D., Buge B., Villa R., Puillandre N., Modica M.V. & Oliverio M. 2024. Spicy food for the egg-cowries: the evolution of corallivory in the Ovulidae (Gastropoda: Cypraeoidea). Frontiers in Marine Science 10: 1323156. DOI:10.3389/fmars.2023.1323156
Résumé [+] [-]Introduction Host-parasite associations provide very useful models to study adaptive processes. We investigated the interaction between carnivorous marine gastropods, the Ovulidae or egg-cowries, and their cnidarian food targets. Ovulidae (Fleming, 1828), is a family of specialized carnivorous caenogastropods that feed by browsing on octocorals (Anthozoa: Octocorallia: Malacalcyonacea and Scleralcyonacea) or, to a much lesser degree, on antipatharians (Anthozoa: Hexacorallia: Antipatharia) and Stylasteridae (Hydrozoa: Hydroidolina: Anthoathecata). Very scanty information is available on the phylogenetic relationships and the degree of specificity of the relationship with the cnidarians of this corallivorous lineage, especially for deep-water taxa. Methods To assess taxonomic identifications and investigate cnidarian/ovulid relationships in the context of their evolution, we generated an extensive molecular dataset comprising two mitochondrial ( cox1 and 16S rDNA ) and one nuclear gene ( 28S rDNA ) from 524 specimens collected worldwide. The coral hosts of the ovulid species have been identified by integrating literature data with new records, employing morphological and/or molecular (the mitochondrial 16S rDNA and mtMSH , and the nuclear ITS2) markers. Results We obtained a molecular phylogenetic framework for the Ovulidae, time-calibrated with nine reliable fossil records. An ancestral state reconstruction allowed to identify Hexacorallia or Hydroidolina as the most likely ancestral cnidarian host for the Ovulidae. Discussion Our phylogenetic hypothesis revealed the existence of groups that do not completely correspond to the currently employed subfamilial arrangement. Concerning trophic ecology, while only pediculariines ( Pedicularia and allied) are associated with hydrozoans (Stylasteridae), our results suggest that some ovulid lineages shifted independently between octocorals and hexacorals.
Campagnes accessibles citées (26) [+] [-]ATIMO VATAE, AURORA 2007, BIOMAGLO, CORSICABENTHOS 1, CORSICABENTHOS 2, CORSICABENTHOS 3, EBISCO, EXBODI, KANACONO, KANADEEP, KARUBENTHOS 2, KAVIENG 2014, KOUMAC 2.3, MADEEP, MADIBENTHOS, MAINBAZA, MIRIKY, NORFOLK 2, NanHai 2014, PAKAIHI I TE MOANA, PANGLAO 2004, PAPUA NIUGINI, SALOMONBOA 3, SANTO 2006, SPANBIOS, ZhongSha 2015
Codes des collections associés: IK (Cnidaires), IM (Mollusques) -
Okamoto M., Chen W.J. & Shinohara G. 2018. Epigonus okamotoi (Perciformes: Epigonidae), a junior synonym of E. draco, with new distributional records for E. atherinoides and E. lifouensis in the West Pacific. Zootaxa 4476(1): 141-150. DOI:10.11646/zootaxa.4476.1.13
Résumé [+] [-]Epigonus okamotoi Fricke, 2017 was originally described on the basis of a single specimen collected from New Britain, Papua New Guinea during one of the exploratory cruises (campaign: MADEEP) in 2014 organized under the Tropical Deep-Sea Benthos program. However, there are no clear differences in the meristic and morphometric characters between the holotype of the new species and specimens of E. draco Okamoto, 2015, including two additional specimens of the species found in the ichthyological collections in the NTUM. The genetic distance (p-distance) between the two “species” at the COI locus was negligible. Accordingly, the holotype of E. okamotoi is considered to be a specimen of E. draco, and the former nominal species is reduced to a junior synonym of E. draco. In addition, we rediagnose and report new distributional records for E. atherinoides (Gilbert, 1905) and E. lifouensis Okamoto & Motomura, 2013 in the West Pacific.
Campagnes accessibles citées (6) [+] [-]
Codes des collections associés: IC (Ichtyologie) -
Okamoto M., Chen W.J. & Motomura H. 2020. New distributional records of three deepwater cardinalfishes Epigonus angustifrons, E. denticulatus, and E. exodon (Perciformes: Epigonidae) in the South Indian Ocean. Cybium 44(2): 165-168. DOI:10.26028/CYBIUM/2020-442-008
Résumé [+] [-]Two specimens (189.7-210.3 mm in standard length: SL) of Epigonus angustifrons Abramov & Manilo, 1987 and two specimens (120.2-138.6 mm SL) of E. denticulatus Dieuzeide, 1950 (Epigonidae) were collected from the St. Paul Seamount, central South Indian Ocean. Also, a single specimen (131.0 mm SL) of E. exodon Okamoto & Motomura, 2012 was collected off Mayotte, Comoros Archipelago, western South Indian Ocean. These specimens represent the first records of the three species from the two mentioned areas. The present specimen of E. exodon is the third specimen collected since the original description and new morphological data for the species based on this additional specimen are provided.
Campagnes accessibles citées (6) [+] [-]
Codes des collections associés: IC (Ichtyologie) -
Poorten J.J.T. 2021. Microcardium pseudonomurai spec. nov. and Microcardium pseudocancellatum spec. nov., two new deep water cockles from the Indo-West Pacific with a note on the status of Trifaricardium (Bivalvia, Cardiidae). Vita Malacologica 20(20): 103-114
Résumé [+] [-]The identity of the Pleistocene Cardium (Acanthocardia) can cellatum Nomura, 1933 (non Cardium cancellatum Gmelin, 1791), is reevaluated based on examination of detailed photos of the holotype. It represents a Frigidocardium species, with shell characters that are close to F. torresi (E.A. Smith, 1885). Its replacement name is Cardium nomurai Kuroda & Habe in Kuroda, 1951. It was selected as type species of the genus Trifaricardium Kuroda & Habe in Habe, 1951. As a consequence, Trifaricardium is a subjective synonym of Frigido cardium Habe, 1951 (syn. nov.). The only remaining species originally described in Trifaricardium, viz T. morrisoni ter Poorten & M. Huber, 2007, is herein placed in Microcardium (comb. nov.). The name Trifaricardium nomurai has mostly been misapplied for a present-day species that is traditionally known from Japan but which is still unnamed. Therefore, Microcardium pseudonomurai spec. nov. is described and its distribution elucidated. Another misapplication of T. nomurai, in use among Chinese workers for material from the South China Sea, turns out to be specifically different and is described as Microcardium pseudocancellatum spec. nov.. The nine Cardiidae species sampled by the zhongsha 2015 expedition are listed, comprising six or seven species newly recorded for the South China Sea. All of these are figured in this paper.
Campagnes accessibles citées (5) [+] [-]
Codes des collections associés: IM (Mollusques) -
Poppe G.T., Tagaro S.P. & Huang S.I. 2023. The recent Colloniidae with a study of the Colloniidae collected by various expeditions of the Muséum national 'Histoire naturelle, Paris. ConchBooks, Harxheim, Germany, 372 pp. ISBN:978-3-948603-36-6
Campagnes accessibles citées (40) [+] [-]ATIMO VATAE, AURORA 2007, BATHUS 2, BATHUS 3, BATHUS 4, BENTHEDI, BERYX 11, BIOPAPUA, BOA0, BOA1, BORDAU 1, BORDAU 2, CHALCAL 1, CONCALIS, EBISCO, EXBODI, KARUBAR, KARUBENTHOS 2, KAVIENG 2014, LAGON, LIFOU 2000, LITHIST, MADEEP, MONTROUZIER, MUSORSTOM 10, MUSORSTOM 7, MUSORSTOM 8, MUSORSTOM 9, NORFOLK 2, PANGLAO 2004, PANGLAO 2005, PAPUA NIUGINI, SALOMON 1, SALOMON 2, SALOMONBOA 3, SMIB 8, TAIWAN 2000, TARASOC, Restreint, ZhongSha 2015
Codes des collections associés: IM (Mollusques) -
Rubio F. & Rolán E. 2022. New species of Vitrinellidae (Gastropoda: Truncatelloidea) from the Indo-Pacific. The genus Circulus Jeffreys, 1865. Museo Nacional de Historia Natural, Universidad de Santiago de Compostela. Museo National de Historia Natural, Universidad de Santiago de Compostela, 422 pp. ISBN:978-84-09-41918-0
Campagnes accessibles citées (48) [+] [-]ATIMO VATAE, AURORA 2007, BATHUS 1, BATHUS 2, BATHUS 4, BENTHAUS, BENTHEDI, BIOGEOCAL, BIOMAGLO, BIOPAPUA, BORDAU 1, BORDAU 2, CORAIL 2, CORINDON 2, EBISCO, EXBODI, INHACA 2011, KANACONO, KARUBAR, KAVIENG 2014, LAGON, LIFOU 2000, MADEEP, MAINBAZA, MD32 (REUNION), MIRIKY, MONTROUZIER, MUSORSTOM 10, MUSORSTOM 2, MUSORSTOM 3, MUSORSTOM 4, MUSORSTOM 6, MUSORSTOM 7, MUSORSTOM 8, MUSORSTOM 9, NORFOLK 2, PANGLAO 2004, PANGLAO 2005, PAPUA NIUGINI, SALOMON 1, SALOMON 2, SALOMONBOA 3, SANTO 2006, Restreint, Restreint, TAIWAN 2002, TARASOC, ZhongSha 2015
Codes des collections associés: IM (Mollusques) -
Sanders M.T., Merle D., Laurin M., Bonillo C. & Puillandre N. 2021. Raising names from the dead: A time-calibrated phylogeny of frog shells (Bursidae, Tonnoidea, Gastropoda) using mitogenomic data. Molecular Phylogenetics and Evolution 156: 107040. DOI:10.1016/j.ympev.2020.107040
Résumé [+] [-]With 59 Recent species, Bursidae, known as «frog shells», are a small but widely distributed group of tropical and subtropical gastropods that are most diverse in the Indo-West Pacific. The present study is aimed at recon structing phylogenetic relationships of bursid gastropods based on extensive and representative taxon sampling. Five genetic markers (cytochrome c oxidase subunit I (cox1), 16 s and 12 s rRNA mitochondrial genes, 28 s rRNA and Histone H3 nuclear gene) were sequenced for over 30 species in every known genus but Crossata. Furthermore, we sequenced the complete mt-genome of 9 species (10 specimens) (Aspa marginata, Marsupina bufo, Korrigania quirihorai, Korrigania fijiensis, Tutufa rubeta, Bursa lamarckii, Lampasopsis rhodostoma (twice), Bufonaria perelegans and Bursa aff. tuberosissima). Our analysis recovered Bursidae as a monophyletic group, whereas the genus Bursa was found to be polyphyletic. The genera Talisman and Dulcerana are resurrected and the genera Alanbeuella gen. nov. and Korrigania gen. nov. are described. Dating analysis using 21 extinct taxa for node and simplified tip calibrations was performed, showing a diversification of the group in two phases. Diversification may be linked to tectonic events leading to biodiversity relocation from the western Tethys to ward the Indo-Pacific.
Campagnes accessibles citées (22) [+] [-]ATIMO VATAE, CONCALIS, EBISCO, EXBODI, GUYANE 2014, INHACA 2011, KARUBENTHOS 2, KARUBENTHOS 2012, MAINBAZA, MIRIKY, NORFOLK 1, NORFOLK 2, PAKAIHI I TE MOANA, PANGLAO 2004, PANGLAO 2005, PAPUA NIUGINI, SALOMON 2, SANTO 2006, TERRASSES, Tuhaa Pae 2013, Restreint, ZhongSha 2015
Codes des collections associés: IM (Mollusques) -
Siegwald J. & Malaquias M.A.E. 2024. Bringing light into deep-sea biodiversity: a systematic revision and molecular phylogeny of the genus Scaphander Montfort, 1810 (Gastropoda: Cephalaspidea), with a focus on the Indo-Pacific. Zoological Journal of the Linnean Society: zlad201. DOI:10.1093/zoolinnean/zlad201
Résumé [+] [-]Abstract Scaphander is a genus of mostly deep-sea, soft-bottom gastropods distributed nearly worldwide. Its taxonomic history is complex, with 32 species currently accepted, most based on shells only. In this work, we revise the diversity and systematics of Scaphander, with a focus on the Indo-Pacific region, using a detailed morphological study and molecular phylogenetics. Conchological and anatomical characters, such as digestive and male reproductive systems were compared, and original descriptions and type material were investigated. Additionally, molecular species delimitation methods were used, such as Assemble Species by Automatic Partitioning (ASAP) based on the gene cytochrome c oxidase subunit I, and the multispecies coalescent method Species Tree And Classification Estimation, Yarely (STACEY) based on a dataset of five gene markers. Thirty-three Scaphander species were recognized worldwide, 10 still based only on shells. Five species are here described as new to science, namely Scaphander amygdalus sp. nov., Scaphander cornus sp. nov., Scaphander obnubilus sp. nov., Scaphander semicallus sp. nov. and Scaphander solomonensis sp. nov. The most diverse region is the Western Pacific (17 species), followed by the Atlantic (12 species) and the Indian Ocean (7 species).
Campagnes accessibles citées (10) [+] [-]DongSha 2014, KARUBAR, MAINBAZA, NanHai 2014, PANGLAO 2005, PAPUA NIUGINI, SALOMON 2, SALOMONBOA 3, Walters Shoal, ZhongSha 2015
Codes des collections associés: IM (Mollusques) -
Strong E.E., Puillandre N., Beu A.G., Castelin M. & Bouchet P. 2019. Frogs and tuns and tritons – A molecular phylogeny and revised family classification of the predatory gastropod superfamily Tonnoidea (Caenogastropoda). Molecular Phylogenetics and Evolution 130: 18-34. DOI:10.1016/j.ympev.2018.09.016
Résumé [+] [-]The Tonnoidea is a moderately diverse group of large, predatory gastropods with ∼360 valid species. Known for their ability to secrete sulfuric acid, they use it to prey on a diversity of invertebrates, primarily echinoderms. Tonnoideans currently are classified in seven accepted families: the comparatively well known, shallow water Bursidae, Cassidae, Personidae, Ranellidae, and Tonnidae, and the lesser-known, deep water Laubierinidae and Pisanianuridae. We assembled a mitochondrial and nuclear gene (COI, 16S, 12S, 28S) dataset for ∼80 species and 38 genera currently recognized as valid. Bayesian analysis of the concatenated dataset recovered a monophyletic Tonnoidea, with Ficus as its sister group. Unexpectedly, Thalassocyon, currently classified in the Ficidae, was nested within the ingroup as the sister group to Distorsionella. Among currently recognized families, Tonnidae, Cassidae, Bursidae and Personidae were supported as monophyletic but the Ranellidae and Ranellinae were not, with Cymatiinae, Ranella and Charonia supported as three unrelated clades. The Laubierinidae and Pisanianuridae together form a monophyletic group. Although not all currently accepted genera have been included in the analysis, the new phylogeny is sufficiently robust and stable to the inclusion/exclusion of nonconserved regions to establish a revised family-level classification with nine families: Bursidae, Cassidae, Charoniidae, Cymatiidae, Laubierinidae, Personidae, Ranellidae, Thalassocyonidae and Tonnidae. The results reveal that many genera as presently circumscribed are para- or polyphyletic and, in some cases support the rescue of several genus-group names from synonymy (Austrosassia, Austrotriton, Laminilabrum, Lampadopsis, Personella, Proxicharonia, Tritonoranella) or conversely, support their synonymization (Biplex with Gyrineum). Several species complexes are also revealed that merit further investigation (e.g., Personidae: Distorsio decipiens, D. reticularis; Bursidae: Bursa tuberosissima; Cassidae: Echinophoria wyvillei, Galeodea bituminata, and Semicassis bisulcata). Consequently, despite their teleplanic larvae, the apparently circumglobal distribution of some tonnoidean species is the result of excessive synonymy. The superfamily is estimated to have diverged during the early Jurassic (∼186 Ma), with most families originating during a narrow ∼20 My window in Albian-Aptian times as part of the Mesozoic Marine Revolution.
Campagnes accessibles citées (20) [+] [-]ATIMO VATAE, AURORA 2007, CONCALIS, EBISCO, GUYANE 2014, INHACA 2011, KARUBENTHOS 2, KARUBENTHOS 2012, MAINBAZA, MIRIKY, NORFOLK 2, PAKAIHI I TE MOANA, PANGLAO 2004, PANGLAO 2005, SALOMON 2, SANTO 2006, TAIWAN 2004, TERRASSES, Restreint, ZhongSha 2015
Codes des collections associés: IM (Mollusques) -
Summers N. & Watling L. 2021. Upper Bathyal Pacific Ocean biogeographic provinces from octocoral distributions. Progress in Oceanography 191: 102509. DOI:10.1016/j.pocean.2020.102509
Résumé [+] [-]Biogeographical classification schemes such as the Marine Ecoregions of the World (MEOW) have been devel oped for continental shelf depths. The lack of faunal data in the deep sea has led to the development of biogeographical units based on oceanographic characteristics. The aim of this study was to propose biogeo graphical schemes for the Upper Bathyal (200–1000 m) across the Pacific Ocean using octocoral distributions. We retrieved over 200 000 octocoral data records from the Deep Sea Coral Data Portal (DSCDP), Ocean Biogeographic Information System (OBIS), Tropical Deep-Sea Benthos program (French National Museum of Natural History), Queensland Museum from the CIDARIS expeditions, and records retrieved from the Siboga expedition reports. We used cluster analysis to examine octocoral distributions against four different biogeo graphical classification schemes. The classification schemes produced mostly concordant patterns with three major faunal distribution barriers: the North Pacific Current isolates the subarctic units by creating a steep temperature gradient; the Subantarctic Front separates the Subantarctic from the rest of the Pacific; and the East Pacific Barrier separates the East Pacific from the Central and West Pacific. Two other smaller but distinct provinces are the Indo-Pacific where Lower Bathyal genera are found in the Upper Bathyal, and Torres Strait/ Coral Sea characterised by mesophotic genera. We propose 12 biogeographic provinces across the Pacific Ocean Upper Bathyal region from 200 to 1000 m depth based on octocoral distributions. The main driver for these units seems to be temperature, a defining feature of water masses. These units could potentially be subdivided into smaller regions based on habitat. Additionally, the clustering of Ecological Marine Units (EMUs) provides evi dence that the Upper Bathyal should in certain regions be divided vertically into two depth zones based on water masses.
Campagnes accessibles citées (9) [+] [-]
Codes des collections associés: IK (Cnidaires) -
TAYLOR J.D., GLOVER E.A., Yuen B. & Williams S.T. 2022. Closing the gap: a new phylogeny and classification of the chemosymbiotic bivalve family Lucinidae with molecular evidence for 73% of living genera. Journal of Molluscan Studies 88(4): eyac025. DOI:10.1093/mollus/eyac025
Résumé [+] [-]New molecular phylogenies of the chemosymbiotic bivalve family Lucinidae, using 18S rRNA, 28S rRNA and cytochrome b genes, include species from genera not previously analysed. Notable additions from Myrteinae are sequences from Rostrilucina, Solelucina and Taylorina species, species of Ustalucina, Gonimyrtea from Leucosphaerinae and additional species of Ctena, Codakia, Lucinoma and Divalucina from Codakiinae. New sequences of Lucininae include the type species of Parvilucina (P. tenuisculpta), Liralucina, Falsolucinoma, Easmithia, Jallenia, Radiolucina and Cardiolucina as well as samples of Loripes orbiculatus from multiple localities. Five major clades, defined as subfamilies, are recognized: Pegophyseminae, Myrteinae, Leucosphaerinae, Codakiinae and Lucininae. Two branches, Fimbriinae and Monitilorinae, are represented by single species. Pegophyseminae are an extremely long-branched group with a sister-group relationship to Leucosphaerinae, while Codakiinae are a sister clade to the Lucininae. In various gene trees, the position of Myrteinae is unstable in relation to Pegophyseminae + Leucosphaerinae, Monitilorinae and Fimbriinae. The Myrteinae are not well resolved, with an ambiguous correlation of molecular and morphological characters. Codakiinae now include Divalucina cumingi, shown to be related to Lucinoma rather than Divaricella and Divalinga of the Lucininae. Leucosphaerinae are a well-supported clade but morphologically disparate, with the positions of Gonimyrtea and Callucina unresolved. Several molecularly distinct subclades are recognized within the Lucininae, especially the Lucinisca, Loripes and Parvilucina groups. Parvilucina species are paraphyletic with P. tenuisculpta, the type species, distinct from the western Atlantic species. Codakia, Ctena and Pegophysema have pan-tropical distributions with former connections disrupted by vicariant events of the closure of the eastern Tethyan and Central American Seaways. Species of Radiolucina, Pleurolucina and Lucinisca are present on either side of the Isthmus of Panama. A new classification of the 96 living lucinid genera is presented, providing a framework for future studies of systematics, ecology, biogeography and bacterial symbioses.
Campagnes accessibles citées (24) [+] [-]ATIMO VATAE, BIOPAPUA, DongSha 2014, EBISCO, EXBODI, GUYANE 2014, ILES DU SALUT, INHACA 2011, KARUBAR, KARUBENTHOS 2012, KAVIENG 2014, KOUMAC 2.3, LAGON, MADEEP, MIRIKY, PANGLAO 2004, PANGLAO 2005, PAPUA NIUGINI, SALOMON 1, SALOMON 2, SALOMONBOA 3, SANTO 2006, TERRASSES, ZhongSha 2015
Codes des collections associés: IM (Mollusques) -
Tongboonkua P., Lee M.Y. & Chen W.J. 2018. A new species of sinistral flatfish of the genus Chascanopsetta (Teleostei: Bothidae) from off Papua New Guinea, western Pacific Ocean. Zootaxa 4476(1): 168. DOI:10.11646/zootaxa.4476.1.16
Résumé [+] [-]Left-eyed flounders of the genus Chascanopsetta Alcock 1894 (Bothidae) occur in the Indian, Pacific, and Atlantic oceans at depths ranging from 120 to 1500 meters. They possess some unique features in bothid fishes including a strongly compressed and elongated body and a tremendously large mouth. Currently, nine species of Chascanopsetta are recognized, and three of them (C. micrognatha Amaoka & Yamamoto 1984, C. lugubris Alcock 1894 and C. prognatha Norman 1939) are distributed in the West Pacific. We collected 25 specimens of Chascanopsetta during 11 biodiversity expeditions carried out mainly in the West Pacific. Among them, eight specimens taken off Papua New Guinea present morphological features that differ from those of the three nominal species known in the West Pacific. In this study, we examined these eight specimens of unknown affinity and compared their morphology to that of specimens of other congeneric species. Results of these comparisons showed that these specimens represent an undescribed species of Chascanopsetta, named herein, C. novaeguineae sp. nov.. The new species resembles C. elski Foroshchuk 1991, which is known only from the Saya de Malha Bank in the western Indian Ocean, in having a high number of gill rakers (> 13). However, the combination of the following characters further distinguishes C. novaeguineae sp. nov. from C. elski: longer jaws, narrower interorbital width, and number of pseudobranches (21–25 vs. 26–27). The DNA sequences from the mitochondrial cytochrome oxidase subunit I (COI) gene from C. novaeguineae sp. nov. and other species were obtained and compared to confirm its taxonomic status and to infer its tentative phylogenetic position within the Chascanopsetta.
Campagnes accessibles citées (11) [+] [-]AURORA 2007, BIOPAPUA, DongSha 2014, KANACONO, KANADEEP, KARUBENTHOS 2, KAVIENG 2014, MADEEP, NanHai 2014, SALOMONBOA 3, ZhongSha 2015
Codes des collections associés: IC (Ichtyologie) -
Vilvens C. & Williams S.T. 2020. New species of Ilanga (Gastropoda: Trochoidea: Solariellidae) from the Indo-West Pacific. Zootaxa 4732(2): 201-257. DOI:10.11646/zootaxa.4732.2.1
Résumé [+] [-]In this study we list and figure a total of 22 species assigned to the genus Ilanga Herbert, 1987 that were collected during recent Paris Museum expeditions, of which 16 are new and described here (listed in the order they appear in the text): Ilanga herberti n. sp., I. euryomphalos n. sp., I. polygramma n. sp., I. stephanophora n. sp., I. harrytaylori n. sp., I. eurystoma n. sp., I. oxeia n. sp., I. cosmia n. sp., I. corrineae n. sp., I. comes n. sp., I. dongshaensis n. sp., I. philia n. sp., I. helicoides n. sp., I. lauensis n. sp., I. mesembrine n. sp. and I. boreia n. sp.. These species occur throughout the Indo-West Pacific, extending the known range of this genus beyond the south west Indian Ocean. We also synonymise Microgaza fulgens Dall, 1907 and Microgaza konos Vilvens, 2009 (syn. nov.) (as I. fulgens). New combinations include Ilanga fulgens and I. navakaensis.
Campagnes accessibles citées (42) [+] [-]BATHUS 1, BATHUS 2, BATHUS 3, BATHUS 4, BIOGEOCAL, BIOPAPUA, BOA1, BORDAU 1, BORDAU 2, CONCALIS, Restreint, Restreint, Restreint, Restreint, DongSha 2014, EBISCO, EXBODI, KARUBAR, KAVIENG 2014, LAGON, LIFOU 2000, MAINBAZA, MIRIKY, MUSORSTOM 10, MUSORSTOM 4, MUSORSTOM 5, MUSORSTOM 6, MUSORSTOM 7, MUSORSTOM 8, NORFOLK 1, NORFOLK 2, PANGLAO 2004, PANGLAO 2005, SALOMON 1, SALOMON 2, SALOMONBOA 3, SANTO 2006, TAIWAN 2001, TAIWAN 2002, TERRASSES, VAUBAN 1978-1979, ZhongSha 2015
Codes des collections associés: IM (Mollusques) -
Vilvens C. 2024. New species and new records of Calliostomatidae (Gastropoda: Trochoidea) from western Pacific (II): Solomon Islands, Papua New Guinea, Indonesia, Philippines and Taiwan. Novapex 25(2): 55-110
Campagnes accessibles citées (21) [+] [-]BIOPAPUA, CORINDON 2, EBISCO, KARUBAR, KAVALAN 2018, KAVIENG 2014, MADEEP, MUSORSTOM 3, NORFOLK 2, NanHai 2014, PANGLAO 2004, PANGLAO 2005, PAPUA NIUGINI, SALOMON 1, SALOMON 2, SALOMONBOA 3, TAIWAN 2000, TAIWAN 2001, TAIWAN 2002, TAIWAN 2004, ZhongSha 2015
Codes des collections associés: IM (Mollusques) -
Williams S.T., Noone E.S., Smith L.M. & Sumner‐Rooney L. 2022. Evolutionary loss of shell pigmentation, pattern, and eye structure in deep‐sea snails in the dysphotic zone. Evolution 76(12): 3026-3040. DOI:10.1111/evo.14647
Résumé [+] [-]Adaptations to habitats lacking light, such as the reduction or loss of eyes and pigmentation, have fascinated biologists for centuries, yet have rarely been studied in the deep sea, the earth's oldest and largest light‐limited habitat. Here, we investigate the evolutionary loss of shell pigmentation, pattern, and eye structure across a family of deep‐sea gastropods (Solariellidae). We show that within our phylogenetic framework, loss of these traits evolves without reversal, at different rates (faster for shell traits than eye structure), and over different depth ranges. Using a Bayesian approach, we find support for correlated evolution of trait loss with increasing depth within the dysphotic region. A transition to trait loss occurs for pattern and eye structure at 400–500 m and for pigmentation at 600–700 m. We also show that one of the sighted, shallow‐water species, Ilanga navakaensis, which may represent the “best‐case” scenario for vision for the family, likely has poor spatial acuity and contrast sensitivity. We therefore propose that pigmentation and pattern are not used for intraspecific communication but are important for camouflage from visual predators, and that the low‐resolution vision of solariellids is likely to require high light intensity for basic visual tasks, such as detecting predators.
Campagnes accessibles citées (21) [+] [-]BIOPAPUA, BOA1, BORDAU 1, CONCALIS, EBISCO, EXBODI, KARUBENTHOS 2, KARUBENTHOS 2012, KAVIENG 2014, MAINBAZA, MIRIKY, NORFOLK 2, NanHai 2014, PANGLAO 2004, PANGLAO 2005, PAPUA NIUGINI, SALOMON 2, SANTO 2006, TARASOC, TERRASSES, ZhongSha 2015
Codes des collections associés: IM (Mollusques) -
Wong M.K. & Chen W.J. 2024. Exploring the phylogeny and depth evolution of cusk eels and their relatives (Ophidiiformes: Ophidioidei). Molecular Phylogenetics and Evolution 199: 108164. DOI:10.1016/j.ympev.2024.108164
Résumé [+] [-]With 289 known species in 51 genera, the ophidiiform family Ophidiidae together with their relatives from the Carapidae (36 species in eight genera) of the same suborder Ophidioidei dominate the deep sea, but some occur also in shallow water habitats. Despite their high species diversity in the deep sea and wide bathymetric distributions, their phylogenetic relationships and evolution remain unexplored due in part to sampling difficulties. Thanks to the biodiversity exploratory program entitled “Tropical Deep-Sea Benthos” and joint efforts between Taiwan and French teams for sampling from different localities across the Indo-West Pacific over the last two decades, we are able to compile comprehensive datasets for investigations. In this study, 59 samples representing 36 of 59 known ophidioid genera are selected and used to construct a multi-gene dataset to infer the phylogenetic relationships of ophidioid fishes and their relatives. Our results reveal that the Ophidiidae forms a paraphyletic group with respect to the Carapidae. The four main clades of Ophidioidei resolved are the (1) clade comprising species from the subfamily Brotulinae; (2) clade that includes species in the genera Acanthonus and Xyelacyba; (3) clade grouping Hypopleuron caninum with species from the family Carapidae; and (4) clade containing the species in the subfamily Brotulotaenilinae, Neobythitinae (in part), and Ophidiinae. Accordingly, we suggest the following new revisions based on our results and proposed morphological diagnoses. The subfamily Brotulinae should be elevated to the family level. The genera Xyelacyba and probably Tauredophidium (unsampled in this study) should be included in the newly established family Acanthonidae with Acanthonus. The families Carapidae and Ophidiidae are re-defined. Our time-calibrated phylogenetic and ancestral depth reconstructions enable us to clarify the evolutionary history of ophidiiform fishes and infer past patterns of species distributions at different depths. While Ophidiiformes is inferred to have originated in shallow waters around 96.25 million years ago (Mya), the common ancestor to the Ophidioidei is inferred to have invaded the deep sea around 90.22 Mya, the dates coinciding with the global anoxic event of the OAE2. The observed bathymetric distribution patterns in Ophidioidei most likely point to the mesopelagic zone as the center of origin and diversification. This was followed by multiple events of depth transitions or range expansions towards either shallower waters or greater depth zones, which were likely triggered by past climate changes during the Paleogene-Neogene.
Campagnes accessibles citées (19) [+] [-]AURORA 2007, BIOMAGLO, BIOPAPUA, DongSha 2014, EXBODI, KANACONO, KANADEEP, KANADEEP 2, KAVIENG 2014, MADEEP, NanHai 2014, Restreint, PAPUA NIUGINI, SAKIZAYA 2019, SAYA, SPANBIOS, TAIWAN 2013, TARASOC, ZhongSha 2015
Codes des collections associés: IC (Ichtyologie) -
Yang Y., Templado J., Puillandre N. & Zardoya R. 2024. Mitogenomic phylogeny of Nassariidae (Neogastropoda: Buccinoidea). Journal of Molluscan Studies 90(3): eyae020. DOI:10.1093/mollus/eyae020
Résumé [+] [-]Mud snails (family Nassariidae) represent a highly diversified lineage within the superfamily Buccinoidea. Recent molecular phylogenies contradicted in some instances the traditional nassariid classification and revealed important levels of homoplasy in phenotypic characters. In order to clarify the boundaries of the family Nassariidae, as well as to inquire on the diversification of the cosmopolitan Nassariinae, a robust phylogenetic framework is needed. Here, the near-complete mitogenomes of 31 species representing almost all lineages of Nassariidae plus several buccinoid outgroups were sequenced. All mitogenomes of buccinoids shared the same gene order, which is identical to the consensus reported for caenogastropods. The monophyly of Nassariidae as previously defined was not confirmed. The reconstructed phylogeny revealed distant relationships between the genera Cyllene, Anentome, Tomlinia, Engoniophos, Phos and Antillophos and the majority of nassariids, represented by Nassariinae + Bullia. Within Nassariinae, a robust phylogeny, which recognized a total of seven regional groups, was reconstructed. The West Atlantic/Mediterranean genus Tritia was divided into three clades. The biogeographical analysis together with the inferred chronogram suggested that Nassariinae might have originated during the late Paleocene in the Indo-Pacific region. Subsequent climate change and continental drift events triggered diversification within the subfamily, leading to the worldwide distribution of current genera.
Campagnes accessibles citées (8) [+] [-]ATIMO VATAE, BIOPAPUA, EXBODI, GUYANE 2014, INHACA 2011, KARUBENTHOS 2012, PAPUA NIUGINI, ZhongSha 2015
Codes des collections associés: IM (Mollusques) -
Zaharias P., Kantor Y.I., Fedosov A.E., Criscione F., Hallan A., Kano Y., Bardin J. & Puillandre N. 2020. Just the once will not hurt: DNA suggests species lumping over two oceans in deep-sea snails (Cryptogemma). Zoological Journal of the Linnean Society 190(2): 532-557. DOI:10.1093/zoolinnean/zlaa010
Résumé [+] [-]Abstract The practice of species delimitation using molecular data commonly leads to the revealing of species complexes and an increase in the number of delimited species. In a few instances, however, DNA-based taxonomy has led to lumping together of previously described species. Here, we delimit species in the genus Cryptogemma (Gastropoda: Conoidea: Turridae), a group of deep-sea snails with a wide geographical distribution, primarily by using the mitochondrial COI gene. Three approaches of species delimitation (ABGD, mPTP and GMYC) were applied to define species partitions. All approaches resulted in eight species. According to previous taxonomic studies and shell morphology, 23 available names potentially apply to the eight Cryptogemma species that were recognized herein. Shell morphometrics, radular characters and geographical and bathymetric distributions were used to link type specimens to these delimited species. In all, 23 of these available names are here attributed to seven species, resulting in 16 synonymizations, and one species is described as new: Cryptogemma powelli sp. nov. We discuss the possible reasons underlying the apparent overdescription of species within Cryptogemma, which is shown here to constitute a rare case of DNA-based species lumping in the hyper-diversified superfamily Conoidea.
Campagnes accessibles citées (25) [+] [-]ATIMO VATAE, AURORA 2007, BIOMAGLO, BIOPAPUA, CONCALIS, DongSha 2014, EBISCO, EXBODI, GUYANE 2014, KANACONO, KANADEEP, KAVIENG 2014, MADEEP, MAINBAZA, MIRIKY, NORFOLK 2, NanHai 2014, PANGLAO 2004, PAPUA NIUGINI, SALOMON 2, SALOMONBOA 3, TAIWAN 2013, TARASOC, TERRASSES, ZhongSha 2015
Codes des collections associés: IM (Mollusques) -
Zaharias P., Kantor Y.I., Fedosov A.E. & Puillandre N. 2024. Coupling DNA barcodes and exon-capture to resolve the phylogeny of Turridae (Gastropoda, Conoidea). Molecular Phylogenetics and Evolution 191: 107969. DOI:10.1016/j.ympev.2023.107969
Campagnes accessibles citées (38) [+] [-]ATIMO VATAE, AURORA 2007, BIOMAGLO, BIOPAPUA, BOA1, CONCALIS, CORSICABENTHOS 1, DongSha 2014, EBISCO, EXBODI, GUYANE 2014, INHACA 2011, KANACONO, KANADEEP, KARUBENTHOS 2, KARUBENTHOS 2012, KAVIENG 2014, KOUMAC 2.1, KOUMAC 2.3, MADEEP, MADIBENTHOS, MAINBAZA, MIRIKY, MUSORSTOM 9, NORFOLK 2, NanHai 2014, PAKAIHI I TE MOANA, PANGLAO 2004, PANGLAO 2005, PAPUA NIUGINI, SALOMON 2, SALOMONBOA 3, SANTO 2006, TAIWAN 2004, TAIWAN 2013, TARASOC, TERRASSES, ZhongSha 2015
Codes des collections associés: IM (Mollusques) -
Zhang R., Fau M., Mah C., Eléaume M., Zhang D., Zhou Y., Lu B. & Wang C. 2024. Systematics of deep-sea starfish order Brisingida (Echinodermata: Asteroidea), with a revised classification and assessments of morphological characters. Molecular Phylogenetics and Evolution 191: 107993. DOI:10.1016/j.ympev.2023.107993
Campagnes accessibles citées (58) [+] [-]Restreint, ANT-XXIX_3, ATIMO VATAE, BATHUS 2, BATHUS 4, Restreint, Restreint, Restreint, BENTHAUS, Restreint, BIOCAL, Restreint, Restreint, Restreint, BIOGEOCAL, BIOMAGLO, BIOPAPUA, Restreint, CEAMARC-AA, CHALCAL 2, CONCALIS, CORINDON 2, Restreint, Restreint, Restreint, Restreint, EBISCO, EXBODI, HALIPRO 2, Restreint, KANACONO, KANADEEP, KANADEEP 2, KARUBENTHOS 2, KAVIENG 2014, MADEEP, MD42 (SIBEX), MUSORSTOM 1, MUSORSTOM 10, MUSORSTOM 2, MUSORSTOM 4, MUSORSTOM 5, MUSORSTOM 6, MUSORSTOM 7, Restreint, NORFOLK 2, NanHai 2014, Restreint, SALOMON 1, SALOMON 2, SALOMONBOA 3, SPANBIOS, TAIWAN 2000, Restreint, TARASOC, Restreint, Walters Shoal, ZhongSha 2015
Codes des collections associés: IE (Échinodermes)
Liste des photos
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Liste des participants
Détail :
- Barazer, Jean-François ( Genavir)
- Maître d'équipage
- Bouchet, Philippe (Malacologie, Muséum national d'Histoire naturelle)
- Chambard, Cyril ( Muséum national d'Histoire naturelle)
- Chen, Jhen-Nien (Ichtyologie, National Taiwan University)
- Chen, Wei-jen (Ichtyologie, National Taiwan University)
- Chef de mission
- Hsu, Ling-Lan
- Lee, Hsin (Malacologie, National Taiwan University)
- Mandon, Perrine ( Muséum national d'Histoire naturelle)
- Martin-Lefèvre, Paula (Carcinologie, Muséum national d'Histoire naturelle)
- Samadi, Sarah (Biologie évolutive, Muséum national d'Histoire naturelle)
- Wang, Teng-Wei
- Yang, Chien-Hui
Cartographie des stations de collectes
Liste des stations
Taxons par accès
| Classe | Accès | Nombre de signalements |
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36 stations/collectes